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MMP RED and GREEN Drug Discovery Kits

Featuring Sensitive, Long-wavelength Fluorogenic Substrates

  • Improved red-shifted substrate with better kinetics and brighter signal, allowing for lower substrate concentrations and resulting in less compound interference
  • Includes active recombinant enzyme, substrate, and assay buffer
  • Convenient real-time kinetics of cleavage is easily determined
  • Microplate format for high-throughput screening
  • Detailed instructions provided

The MMP RED and GREEN Drug Discovery Kits are complete assay systems designed to screen MMP inhibitors using long-wavelength quenched fluorogenic substrates. The assays are performed in a convenient 96-well microplate format, with the compound NNGH also included as a prototypic control inhibitor.

The OmniMMPTM RED and MMP-3 Fluorogenic Substrates, provided in the kits, offer key advantages over other MMP substrates.

  1. Emission at the higher end of the spectrum (576nm and 521nm, respectively, after excitation at 545nm and 494nm) avoids the interference at lower wavelengths often exhibited by screening compounds, and by substances commonly found in biological samples and tissue culture medium.
  2. Highly quenched (very low background), but once cleaved by MMPs emits extremely bright signal.
  3. MMP substrate peptides inherently display poor aqueous solubility, often with Kms near their limits of solubility, making enzyme and inhibitor kinetics difficult. MMP Kms for OmniMMPTM RED and MMP-3 Fluorogenic Substrates are well below the solubility limits of the substrates.
  4. In addition to the efficient binding as exhibited by low Kms, OmniMMPTM RED and MMP-3 Fluorogenic Substrates are avidly cleaved by MMPs, with kcat/Kms in the range of 105-107 M-1sec-1.
  5. Better kinetics allows lower substrate concentrations, avoiding inhibition by the substrate or competition with the inhibitor at the active site.
  6. The ultra-strong fluorescence of OmniMMPTM RED and MMP-3 Fluorogenic Substrates allows for substrate concentrations much lower than the Km, a condition generally desirable in inhibitor screening assays.
Inhibition of ten MMPs by 1.3 µM NNGH.
Determination of kcat/Km for MMP-1 using OmniMMPTM RED. Km = 0.48 µM, kcat/Km = 6.7 x 106 M-1sec-1.
 
Fluorescent emission spectra of small molecule drug camptothecin (light blue), OE33 cells (dark blue), MMP GREEN substrate (green), and MMP RED substrate (red), showing that the MMP GREEN and RED substrates avoid the interference caused by small molecules and cells.
 
 

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