Substrate provides a sensitive means to detect and quantify depropionylation activity with a variety of samples, including nuclear or cellular extracts, purified enzymes (HDACs and sirtuins), bead-bound immunocomplexes, etc. The Fluor de Lys®-Propionyl Substrate, which comprises a propionylated lysine side chain, is first incubated with an active sample. Depropionylation of the substrate sensitizes the substrate so that, in a second step, treatment with the Fluor de Lys® Developer produces a fluorophore (Ex. 360 nm; Em. 460 nm).
HeLa nuclear extract, HDACs (classes I and IIb) and sirtuins (SIRTs 1-3, 5) have all shown activity with the Fluor de Lys
®-Propionyl Substrate.
Product Specification
| Purity: | ≥95% (HPLC) |
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| Formulation: | 50mM solution (50 μl) in dimethylsulfoxide (DMSO). |
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| Long Term Storage: | -80°C |
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| Miscellaneous/General: | Research demonstrates the occurrence of lysine post-translational acylations besides acetylation, including propionylation. Lysine propionylation has been observed in both eukaryotes and prokaryotes and on both histone and non-histone proteins. Acetyltransferases such as p300 and CBP have been found to catalyze propionylation and deacetylases, notably the sirtuins have been shown to have depropionylation activity. |
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| Background / Technical Information: | Application: Study of HDAC or sirtuin kinetics, regulation and inhibitor sensitivity. Ideal for drug discovery and HTS applications. Notes: Must be used in conjunction with Fluor de Lys® Developer (Prod. No. BML-KI105). For sirtuin assays, addition of the co-substrate NAD+ will be required. Assay fluorescence may be calibrated with the Fluor de Lys® Deacetylated Standard (Prod. No. BML-KI142). For examples of appropriate assay conditions for class I or II HDACs see the Prod. No. BML-AK500 manual/protocol: For examples of appropriate assay conditions for sirtuins see the Prod. No. BML-AK555 manual/protocol: |
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General Literature References
Identification and characterization of propionylation at histone H3 lysine 23 in mammalian cells: B. Liu, et al.; J. Biol. Chem.
284, 32288 (2009),
Abstract;
Identification and verification of lysine propionylation and butyrylation in yeast core histones using PTMap software: K. Zhang, et al.; J. Proteome Res.
8, 900 (2009),
Abstract;
Molecular characterization of propionyllysines in non-histone proteins: Z. Cheng, et al.; Mol. Cell. Proteomics
8, 45 (2009),
Abstract;
Acetyl-lysine analog peptides as mechanistic probes of protein deacetylases: B.C. Smith & J.M. Denu; J. Biol. Chem.
282, 37256 (2007),
Abstract;
Lysine propionylation and butyrylation are novel post-translational modifications in histones: Y. Chen, et al.; Mol. Cell. Proteomics
6, 812 (2007),
Abstract;
N-lysine propionylation controls the activity of propionyl-CoA synthetase: J. Garrity, et al.; J. Biol. Chem.
282, 30239 (2007),
Abstract;